GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
lymphocyte antigen 6 family member EENSG00000160932LY6Echr8:143017982-143023832:+68.5
X-prolyl aminopeptidase 2ENSG00000122121XPNPEP2chrX:129738974-129769538:+55
slingshot protein phosphatase 1ENSG00000084112SSH1chr12:108778192-108857590:-68
protein kinase C alphaENSG00000154229PRKCAchr17:66302636-66810743:+510.5
phosphodiesterase 4AENSG00000065989PDE4Achr19:10416773-10469631:+55
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3ENSG00000179913B3GNT3chr19:17794828-17813082:+67
heparan sulfate 6-O-sulfotransferase 1ENSG00000136720HS6ST1chr2:128236716-128318577:-56
G protein subunit alpha i2ENSG00000114353GNAI2chr3:50226292-50259355:+615
myosin light chain kinaseENSG00000065534MYLKchr3:123610049-123884331:-69.5
catenin alpha 1ENSG00000044115CTNNA1chr5:138610967-138935034:+511
family with sequence similarity 126 member AENSG00000122591FAM126Achr7:22889371-23014130:-67
CD160 moleculeENSG00000117281CD160chr1:145719471-145739288:+67
G protein-coupled receptor kinase 5ENSG00000198873GRK5chr10:119207589-119459742:+55.5
contactin 5ENSG00000149972CNTN5chr11:99020953-100358885:+56.5
RAS guanyl releasing protein 1ENSG00000172575RASGRP1chr15:38488103-38565575:-56
IQ motif containing GTPase activating protein 1ENSG00000140575IQGAP1chr15:90388218-90502243:+512
serine protease 21ENSG00000007038PRSS21chr16:2817180-2826304:+57
LY6/PLAUR domain containing 4ENSG00000273111LYPD4chr19:41837074-41844697:-55
symplekinENSG00000125755SYMPKchr19:45815410-45863290:-59.5
cripto, FRL-1, cryptic family 1ENSG00000136698CFC1chr2:130592168-130599575:-55

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