GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
major histocompatibility complex, class I, EENSG00000204592HLA-Echr6:30489467-30494205:+912
major histocompatibility complex, class I, BENSG00000234745HLA-Bchr6:31353872-31357188:-1018
advanced glycosylation end-product specific receptorENSG00000204305AGERchr6:32180968-32184324:-910.5
major histocompatibility complex, class II, DR alphaENSG00000204287HLA-DRAchr6:32439842-32445046:+914
adhesion G protein-coupled receptor F1ENSG00000153292ADGRF1chr6:46997703-47042363:-912
CF transmembrane conductance regulatorENSG00000001626CFTRchr7:117465784-117715971:+1013.5
ADAM metallopeptidase domain 28ENSG00000042980ADAM28chr8:24294040-24359018:+912.5
signaling threshold regulating transmembrane adaptor 1ENSG00000137078SIT1chr9:35649295-35650950:-1013.5
transforming growth factor beta receptor 1ENSG00000106799TGFBR1chr9:99104038-99154192:+1013.5
solute carrier family 31 member 1ENSG00000136868SLC31A1chr9:113221562-113264492:+1017.5
angiotensin I converting enzyme 2ENSG00000130234ACE2chrX:15561033-15602148:-1012.5
lysosomal associated membrane protein 2ENSG00000005893LAMP2chrX:120427827-120469365:-916.5
fibronectin type III domain containing 5ENSG00000160097FNDC5chr1:32862268-32872482:-1011.5
gap junction protein beta 3ENSG00000188910GJB3chr1:34781189-34786369:+1011.5
major facilitator superfamily domain containing 2AENSG00000168389MFSD2Achr1:39955112-39969968:+1011.5
tyrosine kinase with immunoglobulin like and EGF like domains 1ENSG00000066056TIE1chr1:43300993-43323108:+1012.5
receptor tyrosine kinase like orphan receptor 1ENSG00000185483ROR1chr1:63774022-64181498:+1014.5
adhesion molecule with Ig like domain 1ENSG00000181754AMIGO1chr1:109504175-109509738:-910.5
solute carrier family 16 member 1ENSG00000155380SLC16A1chr1:112911847-112957013:-1018.5
integrin subunit alpha 10ENSG00000143127ITGA10chr1:145891208-145910189:-910.5

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