GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
receptor interacting serine/threonine kinase 1ENSG00000137275RIPK1chr6:3063991-3115187:+45
butyrophilin subfamily 2 member A3, pseudogeneENSG00000124549BTN2A3Pchr6:26421391-26432383:+56
erythrocyte membrane protein band 4.1 like 2ENSG00000079819EPB41L2chr6:130839347-131063322:-510
RALBP1 associated Eps domain containing 1ENSG00000135597REPS1chr6:138903493-138988261:-45
RAS like proto-oncogene AENSG00000006451RALAchr7:39623483-39708124:+47
leucine zipper tumor suppressor 1ENSG00000061337LZTS1chr8:20246165-20303963:-44
caveolae associated protein 4ENSG00000170681MURCchr9:100578079-100587906:+44
paralemmin 2ENSG00000243444PALM2chr9:109640788-109946703:+45
BMX non-receptor tyrosine kinaseENSG00000102010BMXchrX:15464246-15556529:+44
ecto-NOX disulfide-thiol exchanger 2ENSG00000165675ENOX2chrX:130623369-130903317:-44
angiopoietin like 3ENSG00000132855ANGPTL3chr1:62597487-62606159:+44
olfactomedin 4ENSG00000102837OLFM4chr13:53028759-53052057:+44
T cell receptor alpha variable 3 (gene/pseudogene)ENSG00000211777TRAV3chr14:21723713-21724321:+44
galectin 3ENSG00000131981LGALS3chr14:55124110-55145413:+49
immunoglobulin heavy constant gamma 4 (G4m marker)ENSG00000211892IGHG4chr14:105624341-105626066:-55
immunoglobulin heavy constant gamma 2 (G2m marker)ENSG00000211893IGHG2chr14:105643052-105644790:-56
immunoglobulin heavy constant gamma 1 (G1m marker)ENSG00000211896IGHG1chr14:105668113-106538344:-58
immunoglobulin heavy constant alpha 1ENSG00000211895IGHA1chr14:105707118-105708665:-57
cerebellin 1 precursorENSG00000102924CBLN1chr16:49277917-49281831:-44
polycystin 1 like 2 (gene/pseudogene)ENSG00000166473PKD1L2chr16:81100875-81220370:-44

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