GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
HCK proto-oncogene, Src family tyrosine kinaseENSG00000101336HCKchr20:32052188-32101856:+68.5
contactin 4ENSG00000144619CNTN4chr3:2098813-3057956:+66.5
lipoprotein lipaseENSG00000175445LPLchr8:19901717-19967258:+56
glycosylphosphatidylinositol anchored molecule likeENSG00000104499GMLchr8:142834247-142916506:+55
cyclin dependent kinase 16ENSG00000102225CDK16chrX:47217860-47229997:+56.5
olfactory receptor family 10 subfamily X member 1 (gene/pseudogene)ENSG00000279111OR10X1chr1:158578919-158579899:-55.5
olfactory receptor family 10 subfamily J member 4 (gene/pseudogene)ENSG00000249730OR10J4chr1:159432204-159433138:+55.5
olfactory receptor family 10 subfamily J member 6 pseudogeneENSG00000158731OR10J6Pchr1:159598298-159599227:+66.5
olfactory receptor family 2 subfamily L member 8 (gene/pseudogene)ENSG00000279263OR2L8chr1:247948858-247949796:+55.5
shadow of prion proteinENSG00000203772SPRNchr10:133420666-133424572:-55
olfactory receptor family 51 subfamily F member 1 (gene/pseudogene)ENSG00000280021OR51F1chr11:4768979-4769938:-66.5
olfactory receptor family 52 subfamily R member 1 (gene/pseudogene)ENSG00000279270OR52R1chr11:4803433-4804380:-66.5
olfactory receptor family 52 subfamily E member 1 (gene/pseudogene)ENSG00000273085OR52E1chr11:5069572-5070497:+66.5
olfactory receptor family 56 subfamily B member 2 pseudogeneENSG00000181017OR56B2Pchr11:5765096-5766049:+66.5
amyloid beta precursor protein binding family B member 1ENSG00000166313APBB1chr11:6395124-6419414:-56
olfactory receptor family 4 subfamily X member 2 (gene/pseudogene)ENSG00000172208OR4X2chr11:48245056-48246080:+55.5
olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)ENSG00000260811OR4C45chr11:50032874-50033794:+55.5
olfactory receptor family 4 subfamily A member 8 (gene/pseudogene)ENSG00000225997OR4A8chr11:54682877-54683821:+55.5
olfactory receptor family 4 subfamily C member 16 (gene/pseudogene)ENSG00000279514OR4C16chr11:55572128-55573060:+55.5
olfactory receptor family 5 subfamily D member 13 (gene/pseudogene)ENSG00000279761OR5D13chr11:55773438-55774382:+55.5

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