GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
synaptotagmin 8ENSG00000149043SYT8chr11:1828307-1837521:+67.5
cholinergic receptor nicotinic alpha 10 subunitENSG00000129749CHRNA10chr11:3665587-3671384:-67.5
leucine rich repeat containing 4CENSG00000148948LRRC4Cchr11:40114203-41459773:-56.5
solute carrier family 22 member 9ENSG00000149742SLC22A9chr11:63369789-63410294:+56.5
V-set and transmembrane domain containing 5ENSG00000214376VSTM5chr11:93818232-93850531:-56.5
cytotoxic and regulatory T cell moleculeENSG00000109943CRTAMchr11:122838500-122872639:+56.5
sodium voltage-gated channel beta subunit 3ENSG00000166257SCN3Bchr11:123629187-123655244:-67.5
V-set and immunoglobulin domain containing 2ENSG00000019102VSIG2chr11:124747472-124752238:-56.5
ATP binding cassette subfamily C member 9ENSG00000069431ABCC9chr12:21797401-21941402:-58
small cell adhesion glycoproteinENSG00000170545SMAGPchr12:51244558-51270890:-56.5
GLI pathogenesis related 1ENSG00000139278GLIPR1chr12:75480680-75503853:+59.5
stomatin like 3ENSG00000133115STOML3chr13:38965925-38991066:-56.5
transmembrane 9 superfamily member 2ENSG00000125304TM9SF2chr13:99501417-99564006:+511.5
armadillo like helical domain containing 4ENSG00000139971C14orf37chr14:57999735-58298139:-56.5
potassium two pore domain channel subfamily K member 10ENSG00000100433KCNK10chr14:88180103-88326907:-69.5
leukocyte receptor tyrosine kinaseENSG00000062524LTKchr15:41503638-41513887:-67.5
synaptosome associated protein 23ENSG00000092531SNAP23chr15:42491233-42545356:+612.5
tryptase gamma 1ENSG00000116176TPSG1chr16:1221651-1225257:-56.5
immunoglobulin superfamily member 6ENSG00000140749IGSF6chr16:21639537-21652660:-56.5
contactin associated protein family member 4ENSG00000152910CNTNAP4chr16:76277278-76559238:+56.5

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