GESPs
During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.
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HGNC Name | Ensembl Gene ID | HGNC Symbol | Genomic Location | Core GESP Score | Final GESP Score |
major histocompatibility complex, class I, H (pseudogene) | ENSG00000206341 | HLA-H | chr6:29887752-29890482:+ | 7 | 10 |
T cell receptor gamma constant 2 | ENSG00000227191 | TRGC2 | chr7:38239580-38368091:- | 6 | 6 |
olfactory receptor family 10 subfamily AC member 1 (gene/pseudogene) | ENSG00000176510 | OR10AC1 | chr7:143510933-143511911:- | 6 | 6.5 |
olfactory receptor family 51 subfamily G member 1 (gene/pseudogene) | ENSG00000278870 | OR51G1 | chr11:4923301-4924407:- | 7 | 7 |
radixin | ENSG00000137710 | RDX | chr11:110174880-110296722:- | 6 | 9 |
glyceraldehyde-3-phosphate dehydrogenase | ENSG00000111640 | GAPDH | chr12:6533927-6538374:+ | 6 | 13 |
LIM domain and actin binding 1 | ENSG00000050405 | LIMA1 | chr12:50175788-50283546:- | 6 | 11 |
neurexophilin 4 | ENSG00000182379 | NXPH4 | chr12:57216795-57226449:+ | 6 | 6 |
cathepsin G | ENSG00000100448 | CTSG | chr14:24573522-24576260:- | 6 | 7 |
immunoglobulin heavy constant mu | ENSG00000211899 | IGHM | chr14:105854220-106235572:- | 7 | 10 |
endogenous retrovirus group K13 member 1 | ENSG00000260565 | CTD-2270P14.1 | chr16:2660349-2673444:- | 6 | 6 |
olfactory receptor family 1 subfamily F member 2 pseudogene | ENSG00000203581 | OR1F2P | chr16:3215611-3216543:+ | 6 | 6 |
cytohesin 1 | ENSG00000108669 | CYTH1 | chr17:78674048-78782297:- | 6 | 8 |
endogenous retrovirus group K9, member 11 | ENSG00000269486 | CTC-360G5.9 | chr19:38935297-38938632:- | 6 | 6 |
adenosine deaminase | ENSG00000196839 | ADA | chr20:44619522-44652233:- | 6 | 10 |
neurofibromin 2 | ENSG00000186575 | NF2 | chr22:29603556-29698598:+ | 6 | 7 |
ceruloplasmin | ENSG00000047457 | CP | chr3:149162410-149222055:- | 7 | 10.5 |
versican | ENSG00000038427 | VCAN | chr5:83471465-83582303:+ | 6 | 9 |
protocadherin beta 18 pseudogene | ENSG00000146001 | PCDHB18P | chr5:141234333-141237529:+ | 7 | 7 |
C1q and TNF related 2 | ENSG00000145861 | C1QTNF2 | chr5:160347751-160370641:- | 6 | 6.5 |
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