GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
solute carrier family 4 member 7ENSG00000033867SLC4A7chr3:27372721-27484420:-1220.5
integrin subunit alpha 9ENSG00000144668ITGA9chr3:37452115-37823514:+1214.5
plexin B1ENSG00000164050PLXNB1chr3:48403854-48430051:-1318
solute carrier family 26 member 6ENSG00000225697SLC26A6chr3:48625723-48635493:-1319.5
limbic system associated membrane proteinENSG00000185565LSAMPchr3:115802363-117139389:-1216.5
FAT atypical cadherin 1ENSG00000083857FAT1chr4:186587783-186726722:-1216.5
butyrophilin subfamily 2 member A1ENSG00000112763BTN2A1chr6:26457904-26476621:+1319.5
blood vessel epicardial substanceENSG00000112276BVESchr6:105096822-105137174:-1314.5
UL16 binding protein 2ENSG00000131015ULBP2chr6:149942000-149949235:+1315.5
tweety family member 3ENSG00000136295TTYH3chr7:2631951-2664802:+1320.5
CD36 moleculeENSG00000135218CD36chr7:80369575-80679277:+1216.5
amine oxidase copper containing 3ENSG00000131471AOC3chr17:42851184-42858130:+1315
solute carrier family 44 member 2ENSG00000129353SLC44A2chr19:10602457-10644559:+1218.5
fibroblast activation protein alphaENSG00000078098FAPchr2:162170684-162245151:-1215
solute carrier family 19 member 1ENSG00000173638SLC19A1chr21:45493572-45544411:-1317.5
CD38 moleculeENSG00000004468CD38chr4:15778275-15853230:+1318.5
cadherin 13ENSG00000140945CDH13chr16:82626803-83800640:+1317.5
alkaline phosphatase, placentalENSG00000163283ALPPchr2:232378534-232382889:+1213.5
frizzled class receptor 4ENSG00000174804FZD4chr11:86945679-86955391:-1217
F2R like trypsin receptor 1ENSG00000164251F2RL1chr5:76818933-76835315:+1216

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