GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
LDL receptor related protein 6ENSG00000070018LRP6chr12:12116025-12267012:-914.5
solute carrier organic anion transporter family member 1B1ENSG00000134538SLCO1B1chr12:21131202-21239246:+911.5
solute carrier family 38 member 4ENSG00000139209SLC38A4chr12:46764761-46832408:-910.5
adenylate cyclase 6ENSG00000174233ADCY6chr12:48766194-48789037:-912.5
solute carrier family 39 member 5ENSG00000139540SLC39A5chr12:56230049-56237846:+910.5
potassium calcium-activated channel subfamily M regulatory beta subunit 4ENSG00000135643KCNMB4chr12:70366276-70434292:+910.5
thyrotropin releasing hormone degrading enzymeENSG00000072657TRHDEchr12:72087266-72670757:+914.5
solute carrier family 41 member 2ENSG00000136052SLC41A2chr12:104802553-104958744:-910.5
ATP binding cassette subfamily C member 4ENSG00000125257ABCC4chr13:95019829-95301446:-915.5
C-type lectin domain containing 14AENSG00000176435CLEC14Achr14:38254103-38256369:-911.5
jagged canonical Notch ligand 2ENSG00000184916JAG2chr14:105140981-105168824:-810.5
signal peptide peptidase like 2AENSG00000138600SPPL2Achr15:50702266-50765808:-913.5
neurotrophic receptor tyrosine kinase 3ENSG00000140538NTRK3chr15:87859751-88256768:-910.5
semaphorin 4BENSG00000185033SEMA4Bchr15:90160604-90229679:+914.5
interleukin 21 receptorENSG00000103522IL21Rchr16:27402162-27452042:+810.5
CLN3 lysosomal/endosomal transmembrane protein, batteninENSG00000188603CLN3chr16:28477279-28495575:-810.5
solute carrier family 6 member 2ENSG00000103546SLC6A2chr16:55655604-55706192:+911.5
solute carrier family 7 member 6ENSG00000103064SLC7A6chr16:68264516-68301823:+811.5
integrin subunit alpha EENSG00000083457ITGAEchr17:3714628-3801243:-810.5
TNF receptor superfamily member 13BENSG00000240505TNFRSF13Bchr17:16929816-16972118:-810.5

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