GESPs

 

During the last two decades, both experimental and computational approaches have been applied to identify and predict the proteins located on cell surface membranes, although each strategy has its own limitations leading to incomplete coverage and false positives. To overcome this problem and comprehensively define the human surfaceome in the genome, we integrated GESP candidates from nine independent resources, in which the cell surface proteins were identified or predicted by distinct strategies.

List of the GESPs in the human genome


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HGNC NameEnsembl Gene IDHGNC SymbolGenomic LocationCore GESP ScoreFinal GESP Score
CD164 molecule like 2ENSG00000174950CD164L2chr1:27379176-27383380:-89.5
gap junction protein beta 4ENSG00000189433GJB4chr1:34759741-34763724:+910.5
solute carrier family 6 member 9ENSG00000196517SLC6A9chr1:43991500-44031467:-913.5
coagulation factor III, tissue factorENSG00000117525F3chr1:94529225-94541800:-915.5
potassium voltage-gated channel subfamily A member 3ENSG00000177272KCNA3chr1:110672465-110675033:-911.5
CD101 moleculeENSG00000134256CD101chr1:117001750-117036476:+810.5
solute carrier family 26 member 9ENSG00000174502SLC26A9chr1:205913048-205943460:-910.5
solute carrier family 30 member 1ENSG00000170385SLC30A1chr1:211571568-211578742:-914.5
unc-5 netrin receptor BENSG00000107731UNC5Bchr10:71212570-71302864:+810.5
ADAM metallopeptidase domain 8ENSG00000151651ADAM8chr10:133262403-133276868:-810.5
5-hydroxytryptamine receptor 3BENSG00000149305HTR3Bchr11:113904677-113946565:+910.5
SID1 transmembrane family member 2ENSG00000149577SIDT2chr11:117178733-117197445:+811.5
anoctamin 2ENSG00000047617ANO2chr12:5531869-5946232:-89.5
CD9 moleculeENSG00000010278CD9chr12:6199715-6238271:+916.5
mannose-6-phosphate receptor, cation dependentENSG00000003056M6PRchr12:8940363-8949955:-815.5
killer cell lectin like receptor B1ENSG00000111796KLRB1chr12:9594551-9607886:-89.5
CD69 moleculeENSG00000110848CD69chr12:9752486-9760901:-811.5
killer cell lectin like receptor F1ENSG00000150045KLRF1chr12:9827481-9845007:+89.5
C-type lectin domain family 1 member BENSG00000165682CLEC1Bchr12:9985642-10013424:-89.5
C-type lectin domain family 1 member AENSG00000150048CLEC1Achr12:10069554-10111627:-89.5

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