Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| ACC | TCGA-OR-A5KT-01A | TCGA-OR-A5KT | SPATS2|TSPAN8 | SPATS2 | TSPAN8 | 12 | 12 | 1 | -1 | 6 | 3 | 3 | 0.62 | 49908396 | 71533628 | tier1 | Out-of-frame | 16685 | NA | 0 |
| ACC | TCGA-OR-A5K5-01A | TCGA-OR-A5K5 | TMEM87B|MERTK | TMEM87B | MERTK | 2 | 2 | 1 | 1 | 19 | 6 | 6 | 0.21 | 112817614 | 112785928 | tier1 | Out-of-frame | 18061 | NA | 0 |
| ACC | TCGA-OR-A5JM-01A | TCGA-OR-A5JM | TPCN1|CTD-2021H9.3 | TPCN1 | CTD-2021H9.3 | 12 | 12 | 1 | -1 | 328 | 177 | 166 | 0.37 | 113724899 | 71441459 | tier1 | Out-of-frame | 18479 | NA | 0 |
| ACC | TCGA-P6-A5OG-01A | TCGA-P6-A5OG | TRAM2|HCRTR2 | TRAM2 | HCRTR2 | 6 | 6 | -1 | 1 | 4 | 2 | 2 | 1.6 | 52441594 | 55142178 | tier1 | In-frame | 18563 | NA | 0 |
| ACC | TCGA-OR-A5KY-01A | TCGA-OR-A5KY | TSPAN18|PIK3R2 | TSPAN18 | PIK3R2 | 11 | 19 | 1 | 1 | 23 | 20 | 20 | 0.05 | 44748837 | 18276970 | tier1 | 5UTR-CDS | 18794 | NA | 0 |
| ACC | TCGA-OR-A5K5-01A | TCGA-OR-A5K5 | TXNDC11|BAMBI | TXNDC11 | BAMBI | 16 | 10 | -1 | 1 | 8 | 11 | 11 | 0.21 | 11836333 | 28970187 | tier1 | Out-of-frame | 18978 | NA | 0 |
| ACC | TCGA-OR-A5KT-01A | TCGA-OR-A5KT | WIBG|SLC16A7 | WIBG | SLC16A7 | 12 | 12 | -1 | 1 | 66 | 36 | 35 | 0.2 | 56297171 | 60173204 | tier2 | Out-of-frame | 19861 | NA | 0 |
| BLCA | TCGA-4Z-AA7R-01A | TCGA-4Z-AA7R | ABCC4|UGGT2 | ABCC4 | UGGT2 | 13 | 13 | -1 | -1 | 16 | 9 | 9 | 3.5 | 95813443 | 96454066 | tier1 | In-frame | 67 | NA | 0.35055 |
| BLCA | TCGA-GV-A3QI-01A | TCGA-GV-A3QI | ABHD2|BIRC6 | ABHD2 | BIRC6 | 15 | 2 | 1 | 1 | 2 | 4 | 3 | 1.4 | 89745591 | 32820101 | tier3 | 3UTR-CDS | 93 | NA | 0.36854 |
| BLCA | TCGA-GU-A42P-01A | TCGA-GU-A42P | ABR|RTN4RL1 | ABR | RTN4RL1 | 17 | 17 | -1 | -1 | 3 | 2 | 2 | 0.18 | 970317 | 1841102 | tier1 | Out-of-frame | 128 | NA | 0.35725 |
| BLCA | TCGA-FJ-A3ZE-01A | TCGA-FJ-A3ZE | ACACA|ADAM9 | ACACA | ADAM9 | 17 | 8 | -1 | 1 | 5 | 7 | 3 | 1.5 | 35687113 | 38865405 | tier1 | Out-of-frame | 223 | NA | 0.3807 |
| BLCA | TCGA-FD-A3SJ-01A | TCGA-FD-A3SJ | ACOXL|UNC5D | ACOXL | UNC5D | 2 | 8 | 1 | 1 | 5 | 5 | 5 | 0.24 | 111850543 | 35406810 | tier1 | Out-of-frame | 299 | NA | 0.35427 |
| BLCA | TCGA-4Z-AA7R-01A | TCGA-4Z-AA7R | ADAM10|C15orf43 | ADAM10 | C15orf43 | 15 | 15 | -1 | 1 | 34 | 24 | 22 | 2.8 | 59009776 | 45266065 | tier1 | In-frame | 403 | NA | 0 |
| BLCA | TCGA-LT-A8JT-01A | TCGA-LT-A8JT | ADAM9|MTL5 | ADAM9 | MTL5 | 8 | 11 | 1 | -1 | 6 | 4 | 3 | 1.7 | 38928922 | 68483407 | tier1 | In-frame | 420 | NA | 0.3758 |
| BLCA | TCGA-XF-A8HG-01A | TCGA-XF-A8HG | ADAM9|UNC5D | ADAM9 | UNC5D | 8 | 8 | 1 | 1 | 7 | 6 | 5 | 0.34 | 38884329 | 35406810 | tier1 | Out-of-frame | 426 | NA | 0.37985 |
| BLCA | TCGA-DK-AA6P-01A | TCGA-DK-AA6P | ADAP1|MAD1L1 | ADAP1 | MAD1L1 | 7 | 7 | -1 | -1 | 5 | 2 | 2 | 0.006 | 966189 | 2108973 | tier1 | In-frame | 453 | NA | 0.38028 |
| BLCA | TCGA-FD-A3SR-01A | TCGA-FD-A3SR | ADCY2|RPAP2 | ADCY2 | RPAP2 | 5 | 1 | 1 | 1 | 3 | 1 | 1 | 0.21 | 7698487 | 92846281 | tier3 | In-frame | 472 | NA | 0.35311 |
| BLCA | TCGA-FD-A3N6-01A | TCGA-FD-A3N6 | ADCY9|TFAP4 | ADCY9 | TFAP4 | 16 | 16 | -1 | -1 | 6 | 4 | 3 | 0.004 | 4163751 | 4312702 | tier1 | Out-of-frame | 487 | non-validated | 0.34662 |
| BLCA | TCGA-BT-A20W-01A | TCGA-BT-A20W | ADIPOR2|DCP1B | ADIPOR2 | DCP1B | 12 | 12 | 1 | -1 | 42 | 11 | 11 | 0.085 | 1800357 | 2077076 | tier1 | 5UTR-CDS | 507 | NA | 0.35072 |
| BLCA | TCGA-FD-A3B6-01A | TCGA-FD-A3B6 | ADORA2B|SYN3 | ADORA2B | SYN3 | 17 | 22 | 1 | -1 | 16 | 19 | 14 | 0.055 | 15848897 | 32992722 | tier1 | Out-of-frame | 538 | NA | 0.36902 |
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