Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| UCEC | TCGA-AJ-A3QS-01A | TCGA-AJ-A3QS | TMEM63B|KIAA0494 | TMEM63B | KIAA0494 | 6 | 1 | 1 | -1 | 2 | 4 | 4 | 0.2 | 44095415 | 47157609 | tier2 | 5UTR-CDS | 18042 | NA | 0 |
| UCEC | TCGA-KP-A3W1-01A | TCGA-KP-A3W1 | TNFSF10|NCEH1 | TNFSF10 | NCEH1 | 3 | 3 | -1 | -1 | 4 | 7 | 6 | 0.093 | 172241043 | 172365904 | tier1 | In-frame | 18343 | NA | 0 |
| UCEC | TCGA-AX-A3G4-01A | TCGA-AX-A3G4 | TNS3|PKD1L1 | TNS3 | PKD1L1 | 7 | 7 | -1 | -1 | 3 | 1 | 1 | 0.71 | 47474880 | 47898483 | tier2 | In-frame | 18415 | NA | 0 |
| UCEC | TCGA-B5-A3FH-01A | TCGA-B5-A3FH | TPX2|HM13 | TPX2 | HM13 | 20 | 20 | 1 | 1 | 90 | 31 | 25 | 0.81 | 30330450 | 30154013 | tier1 | 5UTR-CDS | 18525 | NA | 0 |
| UCEC | TCGA-D1-A3DG-01A | TCGA-D1-A3DG | TRAF3IP2|FYN | TRAF3IP2 | FYN | 6 | 6 | -1 | -1 | 40 | 18 | 16 | 2.3 | 111887647 | 111995833 | tier1 | Out-of-frame | 18554 | NA | 0 |
| UCEC | TCGA-E6-A8L9-01A | TCGA-E6-A8L9 | TRIOBP|CDC42EP1 | TRIOBP | CDC42EP1 | 22 | 22 | 1 | 1 | 28 | 20 | 17 | 0.065 | 38097486 | 37962079 | tier1 | CDS-5UTR | 18678 | NA | 0 |
| UCEC | TCGA-AX-A2H4-01A | TCGA-AX-A2H4 | TRPV3|UBE2G1 | TRPV3 | UBE2G1 | 17 | 17 | -1 | -1 | 7 | 4 | 4 | 0.022 | 3438867 | 4192703 | tier1 | In-frame | 18739 | NA | 0 |
| UCEC | TCGA-AJ-A8CV-01A | TCGA-AJ-A8CV | TSPAN1|CEP152 | TSPAN1 | CEP152 | 1 | 15 | 1 | -1 | 2 | 4 | 4 | 0.007 | 46651630 | 49057864 | tier3 | NA | 18781 | NA | 0 |
| UCEC | TCGA-A5-A1OH-01A | TCGA-A5-A1OH | TSSC4|LSP1 | TSSC4 | LSP1 | 11 | 11 | 1 | 1 | 4 | 28 | 28 | 0.045 | 2422028 | 1901317 | tier1 | 5UTR-CDS | 18823 | NA | 0 |
| UCEC | TCGA-EO-A22X-01A | TCGA-EO-A22X | TUBGCP6|PLXNB2 | TUBGCP6 | PLXNB2 | 22 | 22 | -1 | -1 | 15 | 4 | 4 | 0.032 | 50682148 | 50723094 | tier1 | In-frame | 18951 | NA | 0 |
| UCEC | TCGA-D1-A3JP-01A | TCGA-D1-A3JP | TXNRD2|RTN4R | TXNRD2 | RTN4R | 22 | 22 | -1 | -1 | 6 | 13 | 11 | 0.02 | 19918553 | 20230633 | tier1 | In-frame | 18997 | NA | 0 |
| UCEC | TCGA-EY-A3L3-01A | TCGA-EY-A3L3 | UNK|C1QTNF1 | UNK | C1QTNF1 | 17 | 17 | 1 | 1 | 23 | 25 | 12 | 0.42 | 73781065 | 77040037 | tier1 | CDS-5UTR | 19257 | NA | 0 |
| UCEC | TCGA-BK-A139-02A | TCGA-BK-A139 | UNK|ITGB4 | UNK | ITGB4 | 17 | 17 | 1 | 1 | 17 | 7 | 5 | 0.02 | 73781065 | 73744922 | tier1 | Out-of-frame | 19259 | NA | 0 |
| UCEC | TCGA-EO-A3AS-01A | TCGA-EO-A3AS | USP9X|CD244 | USP9X | CD244 | X | 1 | 1 | -1 | 7 | 3 | 3 | 0.063 | 40945362 | 160808839 | tier1 | 5UTR-CDS | 19439 | NA | 0 |
| UCEC | TCGA-KJ-A3U4-01A | TCGA-KJ-A3U4 | VNN3|PTPRK | VNN3 | PTPRK | 6 | 6 | -1 | -1 | 2 | 2 | 2 | 1.3 | 133055392 | 128563747 | tier2 | Out-of-frame | 19602 | NA | 0 |
| UCEC | TCGA-PG-A5BC-01A | TCGA-PG-A5BC | WWC1|ODZ2 | WWC1 | ODZ2 | 5 | 5 | 1 | 1 | 10 | 8 | 7 | 0.057 | 167719276 | 167689054 | tier1 | Out-of-frame | 19924 | NA | 0 |
| UCEC | TCGA-D1-A3DG-01A | TCGA-D1-A3DG | XPR1|LHX4 | XPR1 | LHX4 | 1 | 1 | 1 | 1 | 21 | 12 | 9 | 0.56 | 180805852 | 180217420 | tier1 | In-frame | 19975 | NA | 0 |
| UCEC | TCGA-BK-A139-01A | TCGA-BK-A139 | ZDHHC20|EFHA1 | ZDHHC20 | EFHA1 | 13 | 13 | -1 | -1 | 2 | 10 | 10 | 0.44 | 21987791 | 22084240 | tier3 | Out-of-frame | 20213 | non-validated | 0 |
| UCEC | TCGA-AX-A3GI-01A | TCGA-AX-A3GI | ZMYND8|SULF2 | ZMYND8 | SULF2 | 20 | 20 | -1 | -1 | 4 | 6 | 5 | 3.3 | 45976600 | 46331414 | tier1 | In-frame | 20352 | NA | 0 |
| UCEC | TCGA-AJ-A6NU-01A | TCGA-AJ-A6NU | ZNF618|KIAA0195 | ZNF618 | KIAA0195 | 9 | 17 | 1 | 1 | 19 | 17 | 15 | 1.8 | 116638693 | 73467881 | tier1 | CDS-5UTR | 20592 | NA | 0 |
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