Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| UCEC | TCGA-A5-A2K4-01A | TCGA-A5-A2K4 | SRGAP3|LHFPL4 | SRGAP3 | LHFPL4 | 3 | 3 | -1 | -1 | 3 | 1 | 1 | 0.44 | 9054992 | 9547887 | tier2 | Out-of-frame | 16851 | NA | 0 |
| UCEC | TCGA-EO-A1Y7-01A | TCGA-EO-A1Y7 | SRGAP3|LHFPL4 | SRGAP3 | LHFPL4 | 3 | 3 | -1 | -1 | 2 | 3 | 3 | 0.44 | 9290569 | 9547887 | tier2 | In-frame | 16852 | NA | 0 |
| UCEC | TCGA-KJ-A3U4-01A | TCGA-KJ-A3U4 | SRGAP3|LHFPL4 | SRGAP3 | LHFPL4 | 3 | 3 | -1 | -1 | 9 | 2 | 2 | 0.44 | 9290569 | 9547887 | tier1 | In-frame | 16853 | NA | 0 |
| UCEC | TCGA-AP-A5FX-01A | TCGA-AP-A5FX | SRP68|EXOC7 | SRP68 | EXOC7 | 17 | 17 | -1 | -1 | 4 | 1 | 1 | 0.42 | 74063298 | 74090662 | tier3 | Out-of-frame | 16858 | NA | 0 |
| UCEC | TCGA-B5-A3S1-01A | TCGA-B5-A3S1 | ST14|APLP2 | ST14 | APLP2 | 11 | 11 | 1 | 1 | 16 | 15 | 13 | 0.011 | 130078579 | 130010293 | tier1 | In-frame | 16925 | NA | 0 |
| UCEC | TCGA-BK-A139-02A | TCGA-BK-A139 | ST3GAL3|TIE1 | ST3GAL3 | TIE1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 0.34 | 44303983 | 43770522 | tier2 | Out-of-frame | 16938 | NA | 0 |
| UCEC | TCGA-D1-A3DG-01A | TCGA-D1-A3DG | STIM1|CLIP1 | STIM1 | CLIP1 | 11 | 12 | 1 | -1 | 8 | 7 | 6 | 0.85 | 3877639 | 122773088 | tier1 | Out-of-frame | 17034 | NA | 0 |
| UCEC | TCGA-AJ-A3QS-01A | TCGA-AJ-A3QS | STIM1|GPR160 | STIM1 | GPR160 | 11 | 3 | 1 | 1 | 5 | 7 | 5 | 1 | 3877639 | 169756703 | tier1 | CDS-5UTR | 17036 | NA | 0 |
| UCEC | TCGA-A5-A7WK-01A | TCGA-A5-A7WK | STXBP1|CACNA2D2 | STXBP1 | CACNA2D2 | 9 | 3 | 1 | -1 | 8 | 9 | 7 | 0.77 | 130425632 | 50418557 | tier1 | Out-of-frame | 17144 | NA | 0 |
| UCEC | TCGA-D1-A3JP-01A | TCGA-D1-A3JP | SUSD4|DEGS1 | SUSD4 | DEGS1 | 1 | 1 | -1 | 1 | 17 | 38 | 35 | 3.2 | 223536620 | 224377279 | tier1 | In-frame | 17201 | NA | 0 |
| UCEC | TCGA-PG-A915-01A | TCGA-PG-A915 | SYMPK|DYRK1B | SYMPK | DYRK1B | 19 | 19 | -1 | -1 | 39 | 28 | 22 | 0.38 | 46366316 | 40322608 | tier1 | 5UTR-5UTR | 17233 | NA | 0 |
| UCEC | TCGA-EY-A3QX-01A | TCGA-EY-A3QX | SYTL3|SNX9 | SYTL3 | SNX9 | 6 | 6 | 1 | 1 | 4 | 7 | 7 | 1.2 | 159134910 | 158342563 | tier1 | In-frame | 17284 | NA | 0 |
| UCEC | TCGA-EY-A2OQ-01A | TCGA-EY-A2OQ | TAOK1|CPD | TAOK1 | CPD | 17 | 17 | 1 | 1 | 26 | 27 | 26 | 1.5 | 27718042 | 28747859 | tier1 | 5UTR-CDS | 17397 | NA | 0 |
| UCEC | TCGA-A5-A3LP-01A | TCGA-A5-A3LP | TECR|PKN1 | TECR | PKN1 | 19 | 19 | 1 | 1 | 122 | 97 | 90 | 0.037 | 14640523 | 14580153 | tier1 | Out-of-frame | 17652 | NA | 0 |
| UCEC | TCGA-PG-A7D5-01A | TCGA-PG-A7D5 | TGOLN2|IMMT | TGOLN2 | IMMT | 2 | 2 | -1 | -1 | 13 | 20 | 18 | 0.69 | 85552038 | 86372004 | tier1 | Out-of-frame | 17752 | NA | 0 |
| UCEC | TCGA-EY-A54A-01A | TCGA-EY-A54A | TM2D1|STOX2 | TM2D1 | STOX2 | 1 | 4 | -1 | 1 | 4 | 2 | 2 | 0.72 | 62189385 | 184922478 | tier1 | In-frame | 17861 | NA | 0 |
| UCEC | TCGA-EO-A3AS-01A | TCGA-EO-A3AS | TMEM104|SLC9A3R1 | TMEM104 | SLC9A3R1 | 17 | 17 | 1 | 1 | 8 | 17 | 15 | 0.008 | 72773514 | 72758151 | tier1 | In-frame | 17926 | NA | 0 |
| UCEC | TCGA-D1-A3JP-01A | TCGA-D1-A3JP | TMEM123|MMP10 | TMEM123 | MMP10 | 11 | 11 | -1 | -1 | 8 | 8 | 8 | 0.22 | 102319543 | 102650092 | tier1 | Out-of-frame | 17948 | NA | 0 |
| UCEC | TCGA-AJ-A3BF-01A | TCGA-AJ-A3BF | TMEM184B|DNAH14 | TMEM184B | DNAH14 | 22 | 1 | -1 | 1 | 11 | 6 | 6 | 0.51 | 38668890 | 225562390 | tier1 | 5UTR-CDS | 18001 | NA | 0 |
| UCEC | TCGA-B5-A0JN-01A | TCGA-B5-A0JN | TMEM184B|SUN2 | TMEM184B | SUN2 | 22 | 22 | -1 | -1 | 5 | 2 | 2 | 0.043 | 38668890 | 39141816 | tier1 | 5UTR-CDS | 18003 | non-validated | 0 |
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