Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| UCEC | TCGA-PG-A7D5-01A | TCGA-PG-A7D5 | SH3GLB2|CACNA1A | SH3GLB2 | CACNA1A | 9 | 19 | -1 | -1 | 2 | 3 | 3 | 0.92 | 131790371 | 13414698 | tier2 | In-frame | 15824 | NA | 0 |
| UCEC | TCGA-A5-A1OH-01A | TCGA-A5-A1OH | SIAE|GRIK4 | SIAE | GRIK4 | 11 | 11 | -1 | 1 | 2 | 5 | 5 | 0.3 | 124530524 | 120823564 | tier3 | In-frame | 15905 | NA | 0 |
| UCEC | TCGA-FI-A2EY-01A | TCGA-FI-A2EY | SIL1|CTNNA1 | SIL1 | CTNNA1 | 5 | 5 | -1 | 1 | 2 | 1 | 1 | 0.021 | 138532130 | 138264935 | tier3 | 5UTR-CDS | 15920 | NA | 0 |
| UCEC | TCGA-2E-A9G8-01A | TCGA-2E-A9G8 | SIL1|SLC23A1 | SIL1 | SLC23A1 | 5 | 5 | -1 | -1 | 6 | 3 | 2 | 0.55 | 138456724 | 138716575 | tier1 | Out-of-frame | 15925 | NA | 0 |
| UCEC | TCGA-PG-A914-01A | TCGA-PG-A914 | SIPA1L3|RAB8A | SIPA1L3 | RAB8A | 19 | 19 | 1 | 1 | 3 | 11 | 10 | 0.051 | 38397998 | 16236280 | tier2 | 5UTR-CDS | 15955 | NA | 0 |
| UCEC | TCGA-BK-A139-02A | TCGA-BK-A139 | SKAP1|HOXB6 | SKAP1 | HOXB6 | 17 | 17 | -1 | -1 | 2 | 1 | 1 | 0.19 | 46507437 | 46675590 | tier2 | CDS-5UTR | 15971 | NA | 0 |
| UCEC | TCGA-E6-A8L9-01A | TCGA-E6-A8L9 | SLC12A7|TERT | SLC12A7 | TERT | 5 | 5 | -1 | -1 | 4 | 3 | 1 | 0.76 | 1060459 | 1282739 | tier2 | Out-of-frame | 16017 | NA | 0 |
| UCEC | TCGA-2E-A9G8-01A | TCGA-2E-A9G8 | SLC12A8|SLC41A3 | SLC12A8 | SLC41A3 | 3 | 3 | -1 | -1 | 11 | 1 | 1 | 1 | 124996570 | 125745322 | tier2 | In-frame | 16023 | NA | 0 |
| UCEC | TCGA-A5-A1OH-01A | TCGA-A5-A1OH | SLC22A23|RP4-761I2.2 | SLC22A23 | RP4-761I2.2 | 6 | 6 | -1 | 1 | 11 | 8 | 7 | 0.32 | 3456140 | 11134636 | tier1 | Out-of-frame | 16072 | NA | 0 |
| UCEC | TCGA-B5-A0JN-01A | TCGA-B5-A0JN | SLC25A44|SEMA4A | SLC25A44 | SEMA4A | 1 | 1 | 1 | 1 | 6 | 3 | 3 | 0.01 | 156164038 | 156142617 | tier1 | 5UTR-CDS | 16118 | non-validated | 0 |
| UCEC | TCGA-AJ-A3IA-01A | TCGA-AJ-A3IA | SLC26A6|CYP2C8 | SLC26A6 | CYP2C8 | 3 | 10 | -1 | -1 | 16 | 11 | 11 | 0.69 | 48672804 | 96798795 | tier1 | Out-of-frame | 16121 | NA | 0 |
| UCEC | TCGA-BK-A139-01A | TCGA-BK-A139 | SLC2A12|SGK1 | SLC2A12 | SGK1 | 6 | 6 | -1 | -1 | 3 | 12 | 11 | 0.15 | 134349519 | 134583286 | tier1 | Out-of-frame | 16129 | non-validated | 0 |
| UCEC | TCGA-AX-A3G3-01A | TCGA-AX-A3G3 | SLC38A1|GTSE1 | SLC38A1 | GTSE1 | 12 | 22 | -1 | 1 | 36 | 24 | 24 | 0.11 | 46662648 | 46719087 | tier1 | 5UTR-CDS | 16176 | NA | 0 |
| UCEC | TCGA-AX-A3FW-01A | TCGA-AX-A3FW | SLC39A5|KRT84 | SLC39A5 | KRT84 | 12 | 12 | 1 | -1 | 4 | 3 | 3 | 0.52 | 56626656 | 52774367 | tier1 | In-frame | 16210 | NA | 0 |
| UCEC | TCGA-B5-A5OD-01A | TCGA-B5-A5OD | SLC43A2|SMYD4 | SLC43A2 | SMYD4 | 17 | 17 | -1 | -1 | 2 | 4 | 3 | 1.6 | 1516489 | 1686770 | tier2 | Out-of-frame | 16228 | NA | 0 |
| UCEC | TCGA-BK-A139-02A | TCGA-BK-A139 | SLC7A6|PLA2G15 | SLC7A6 | PLA2G15 | 16 | 16 | 1 | 1 | 6 | 2 | 1 | 2.1 | 68300624 | 68288822 | tier3 | 5UTR-CDS | 16294 | NA | 0 |
| UCEC | TCGA-AP-A5FX-01A | TCGA-AP-A5FX | SNX9|ZDHHC14 | SNX9 | ZDHHC14 | 6 | 6 | 1 | 1 | 2 | 1 | 1 | 3.9 | 158353304 | 157963617 | tier3 | Out-of-frame | 16568 | NA | 0 |
| UCEC | TCGA-PG-A914-01A | TCGA-PG-A914 | SPECC1|HM13 | SPECC1 | HM13 | 17 | 20 | 1 | 1 | 4 | 8 | 8 | 0.53 | 20135718 | 30115287 | tier2 | Out-of-frame | 16688 | NA | 0 |
| UCEC | TCGA-E6-A8L9-01A | TCGA-E6-A8L9 | SPECC1|STAMBP | SPECC1 | STAMBP | 17 | 2 | 1 | 1 | 23 | 22 | 18 | 6.8 | 20163607 | 74100479 | tier1 | CDS-3UTR | 16689 | NA | 0 |
| UCEC | TCGA-AX-A2H4-01A | TCGA-AX-A2H4 | SPON1|CD47 | SPON1 | CD47 | 11 | 3 | 1 | -1 | 3 | 5 | 5 | 0.28 | 14063201 | 107799191 | tier1 | Out-of-frame | 16742 | NA | 0 |
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