TCSA Transcript fusion

  FCG

  Home

  GESPs

  Search

  Expression

  Copy Number

  Mutation

  Transcript Fusion

  Download

  Help

  About

Transcript Fusion

The transcript fusion data of TCGA were retrieved from the TumorFusions database.

List of the transcript fusions of the GESPs in each cancer type

Show entries each page Jump to page
Showing page 307	first page \| previous page \| next page \| last page

Cancer Type	TCGA_barcode	Patient	Fusion_transcript	Gene_A	Gene_B	Chr_A	Chr_B	Strand_A	Strand_B	#_Discordant_Pairs	#_JSR	#_perfect_JSR	Evalue	Junction_A	Junction_B	Tier	Frame	TN	WGS_validation	Centrality
THCA	TCGA-EL-A3ZK-01A	TCGA-EL-A3ZK	FN1\|ATP2B4	FN1	ATP2B4	2	1	-1	1	2	3	1	0.23	216225177	203671172	tier4	3UTR-CDS	6590	NA	0.38175
THCA	TCGA-ET-A25I-01A	TCGA-ET-A25I	GNAS\|CLCN3	GNAS	CLCN3	20	4	1	1	2	262	8	3.1	57486241	170623929	tier3	NA	7184	NA	0.37773
THCA	TCGA-DE-A2OL-01A	TCGA-DE-A2OL	GNAS\|CLIP1	GNAS	CLIP1	20	12	1	-1	2	8	7	0.78	57486241	122819252	tier3	3UTR-CDS	7185	non-validated	0.37643
THCA	TCGA-IM-A3EB-01A	TCGA-IM-A3EB	GNAS\|ELK3	GNAS	ELK3	20	12	1	1	2	36	31	0.046	57486247	96588323	tier3	3UTR-5UTR	7189	NA	0.38392
THCA	TCGA-DJ-A13S-01A	TCGA-DJ-A13S	GNAS\|HEG1	GNAS	HEG1	20	3	1	-1	2	7	7	0.35	57486241	124692749	tier3	3UTR-CDS	7193	NA	0.3744
THCA	TCGA-H2-A2K9-01A	TCGA-H2-A2K9	GNAS\|HEG1	GNAS	HEG1	20	3	1	-1	2	9	8	0.35	57486241	124692749	tier3	3UTR-CDS	7194	NA	0.3744
THCA	TCGA-EM-A3OB-01A	TCGA-EM-A3OB	GNAS\|SEC63	GNAS	SEC63	20	6	1	-1	2	186	120	0.85	57486241	108214782	tier4	NA	7198	NA	0.3749
THCA	TCGA-BJ-A192-01A	TCGA-BJ-A192	GNAS\|SIAE	GNAS	SIAE	20	11	1	-1	2	100	9	0.21	57486241	124543777	tier3	3UTR-5UTR	7199	NA	0.37115
THCA	TCGA-ET-A3BQ-01B	TCGA-ET-A3BQ	GNAS\|SIAE	GNAS	SIAE	20	11	1	-1	2	26	3	0.21	57486241	124543777	tier3	3UTR-5UTR	7200	NA	0.37115
THCA	TCGA-ET-A25P-01A	TCGA-ET-A25P	GNAS\|THSD4	GNAS	THSD4	20	15	1	1	2	3	1	0.1	57486241	72072881	tier3	3UTR-CDS	7205	NA	0.37286
THCA	TCGA-J8-A3YD-01A	TCGA-J8-A3YD	GNAS\|ZNFX1	GNAS	ZNFX1	20	20	1	-1	2	44	37	3.4	57486247	47863418	tier4	3UTR-CDS	7209	NA	0.37375
THCA	TCGA-EL-A3CN-01A	TCGA-EL-A3CN	GSN\|CTNNB1	GSN	CTNNB1	9	3	1	1	2	1	1	4.9	124095016	41240996	tier3	3UTR-5UTR	7495	NA	0.38311
THCA	TCGA-H2-A26U-01A	TCGA-H2-A26U	GSN\|HLA-DPB1	GSN	HLA-DPB1	9	6	1	1	2	1	1	0.58	124095016	33043760	tier3	3UTR-5UTR	7497	NA	0.37565
THCA	TCGA-EL-A4KD-01A	TCGA-EL-A4KD	GTF2IRD1\|ALK	GTF2IRD1	ALK	7	2	1	-1	14	33	23	0.37	73935627	29446394	tier1	In-frame	7538	NA	0.38516
THCA	TCGA-GE-A2C6-01A	TCGA-GE-A2C6	HLA-B\|RNASEH2B	HLA-B	RNASEH2B	6	13	-1	1	2	18	12	100	31321649	51530588	tier4	3UTR-CDS	7823	NA	0.37103
THCA	TCGA-E8-A417-01A	TCGA-E8-A417	HLA-C\|TYK2	HLA-C	TYK2	6	19	-1	-1	2	86	54	0.072	31236528	10491352	tier3	3UTR-5UTR	7833	NA	0.37928
THCA	TCGA-EM-A3O6-01A	TCGA-EM-A3O6	HTATSF1\|BRS3	HTATSF1	BRS3	X	X	1	1	62	19	17	0.3	135586622	135572292	tier1	Out-of-frame	8024	NA	0.3803
THCA	TCGA-DJ-A3UM-01A	TCGA-DJ-A3UM	IGF2R\|ARFGEF2	IGF2R	ARFGEF2	6	20	1	1	2	2	2	0.82	160527583	47615777	tier3	3UTR-CDS	8111	NA	0.36908
THCA	TCGA-FY-A40L-01A	TCGA-FY-A40L	IQGAP1\|ZNF774	IQGAP1	ZNF774	15	15	1	1	29	10	9	2.3	90934105	90897874	tier1	CDS-5UTR	8325	NA	0.38786
THCA	TCGA-DJ-A4UP-01A	TCGA-DJ-A4UP	IRF2BP2\|NTRK1	IRF2BP2	NTRK1	1	1	-1	1	241	195	11	0.45	234744241	156844363	tier1	In-frame	8343	NA	0.38899

Showing page 307

first page | previous page | next page | last page

  TCGA

  GDC

  NCI