Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| PRAD | TCGA-KK-A8I4-01A | TCGA-KK-A8I4 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 13 | 10 | 10 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18216 | NA | 0 |
| PRAD | TCGA-KK-A8I8-01A | TCGA-KK-A8I8 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 21 | 10 | 10 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18217 | NA | 0 |
| PRAD | TCGA-KK-A8IA-01A | TCGA-KK-A8IA | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 29 | 21 | 18 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18218 | NA | 0 |
| PRAD | TCGA-KK-A8IC-01A | TCGA-KK-A8IC | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 53 | 47 | 40 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18219 | NA | 0 |
| PRAD | TCGA-KK-A8IH-01A | TCGA-KK-A8IH | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 162 | 80 | 73 | 2 | 42866283 | 39817544 | tier2 | Out-of-frame | 18220 | NA | 0 |
| PRAD | TCGA-KK-A8II-01A | TCGA-KK-A8II | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 58 | 24 | 24 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18221 | NA | 0 |
| PRAD | TCGA-KK-A8IM-01A | TCGA-KK-A8IM | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 15 | 20 | 20 | 2 | 42880008 | 39956869 | tier1 | 5UTR-5UTR | 18222 | NA | 0 |
| PRAD | TCGA-M7-A71Z-01A | TCGA-M7-A71Z | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 19 | 19 | 19 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18223 | NA | 0 |
| PRAD | TCGA-MG-AAMC-01A | TCGA-MG-AAMC | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 41 | 32 | 27 | 2 | 42879877 | 39817544 | tier1 | 5UTR-CDS | 18224 | NA | 0 |
| PRAD | TCGA-QU-A6IN-01A | TCGA-QU-A6IN | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 7 | 23 | 20 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18225 | NA | 0 |
| PRAD | TCGA-TP-A8TT-01A | TCGA-TP-A8TT | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 18 | 30 | 26 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18226 | NA | 0 |
| PRAD | TCGA-V1-A8MK-01A | TCGA-V1-A8MK | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 5 | 6 | 6 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18227 | NA | 0 |
| PRAD | TCGA-V1-A8WS-01A | TCGA-V1-A8WS | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 101 | 100 | 94 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18228 | NA | 0 |
| PRAD | TCGA-V1-A9O9-01A | TCGA-V1-A9O9 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 217 | 315 | 309 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18229 | NA | 0 |
| PRAD | TCGA-V1-A9OY-01A | TCGA-V1-A9OY | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 6 | 2 | 1 | 2 | 42879877 | 39956869 | tier2 | 5UTR-5UTR | 18230 | NA | 0 |
| PRAD | TCGA-V1-A9ZG-01A | TCGA-V1-A9ZG | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 49 | 45 | 43 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18231 | NA | 0 |
| PRAD | TCGA-VN-A88K-01A | TCGA-VN-A88K | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 21 | 12 | 11 | 2 | 42870046 | 39956869 | tier1 | CDS-5UTR | 18232 | NA | 0 |
| PRAD | TCGA-VN-A88L-01A | TCGA-VN-A88L | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 114 | 152 | 140 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18233 | NA | 0 |
| PRAD | TCGA-VN-A88M-01A | TCGA-VN-A88M | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 10 | 11 | 10 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18234 | NA | 0 |
| PRAD | TCGA-VN-A88Q-01A | TCGA-VN-A88Q | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 49 | 51 | 48 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18235 | NA | 0 |
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