Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| PRAD | TCGA-J4-A83J-01A | TCGA-J4-A83J | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 8 | 7 | 6 | 2 | 42870046 | 39817544 | tier4 | In-frame | 18196 | NA | 0 |
| PRAD | TCGA-J4-A83K-01A | TCGA-J4-A83K | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 46 | 21 | 21 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18197 | NA | 0 |
| PRAD | TCGA-J4-AATV-01A | TCGA-J4-AATV | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 4 | 3 | 3 | 2 | 42879877 | 39956869 | tier1 | 5UTR-5UTR | 18198 | NA | 0 |
| PRAD | TCGA-J9-A52B-01A | TCGA-J9-A52B | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 136 | 86 | 81 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18199 | NA | 0 |
| PRAD | TCGA-J9-A8CK-01A | TCGA-J9-A8CK | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 89 | 64 | 58 | 2 | 42879877 | 39795483 | tier1 | 5UTR-CDS | 18200 | NA | 0 |
| PRAD | TCGA-J9-A8CM-01A | TCGA-J9-A8CM | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 24 | 23 | 21 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18201 | NA | 0 |
| PRAD | TCGA-KC-A4BN-01A | TCGA-KC-A4BN | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 13 | 4 | 4 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18202 | NA | 0 |
| PRAD | TCGA-KC-A4BR-01A | TCGA-KC-A4BR | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 14 | 9 | 8 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18203 | NA | 0 |
| PRAD | TCGA-KC-A4BV-01A | TCGA-KC-A4BV | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 28 | 14 | 13 | 2 | 42879877 | 39817544 | tier1 | 5UTR-CDS | 18204 | NA | 0 |
| PRAD | TCGA-KC-A7F6-01A | TCGA-KC-A7F6 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 15 | 19 | 17 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18205 | NA | 0 |
| PRAD | TCGA-KK-A59Y-01A | TCGA-KK-A59Y | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 13 | 7 | 7 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18206 | NA | 0 |
| PRAD | TCGA-KK-A6DY-01A | TCGA-KK-A6DY | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 140 | 84 | 77 | 2 | 42860321 | 39817544 | tier1 | Out-of-frame | 18207 | NA | 0 |
| PRAD | TCGA-KK-A6E1-01A | TCGA-KK-A6E1 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 104 | 37 | 35 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18208 | NA | 0 |
| PRAD | TCGA-KK-A6E2-01A | TCGA-KK-A6E2 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 176 | 122 | 112 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18209 | NA | 0 |
| PRAD | TCGA-KK-A6E4-01A | TCGA-KK-A6E4 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 9 | 7 | 5 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18210 | NA | 0 |
| PRAD | TCGA-KK-A6E6-01A | TCGA-KK-A6E6 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 22 | 13 | 13 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18211 | NA | 0 |
| PRAD | TCGA-KK-A7AU-01A | TCGA-KK-A7AU | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 17 | 17 | 15 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18212 | NA | 0 |
| PRAD | TCGA-KK-A7B1-01A | TCGA-KK-A7B1 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 71 | 61 | 59 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18213 | NA | 0 |
| PRAD | TCGA-KK-A7B2-01A | TCGA-KK-A7B2 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 48 | 26 | 24 | 2 | 42866283 | 39817544 | tier1 | Out-of-frame | 18214 | NA | 0 |
| PRAD | TCGA-KK-A7B4-01A | TCGA-KK-A7B4 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 50 | 36 | 34 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18215 | NA | 0 |
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