Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| PRAD | TCGA-HC-8213-01A | TCGA-HC-8213 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 10 | 11 | 9 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18176 | NA | 0 |
| PRAD | TCGA-HC-8257-01A | TCGA-HC-8257 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 40 | 51 | 48 | 2 | 42870046 | 39956869 | tier1 | CDS-5UTR | 18177 | NA | 0 |
| PRAD | TCGA-HC-8259-01A | TCGA-HC-8259 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 30 | 20 | 17 | 2 | 42878372 | 39817544 | tier1 | NA | 18178 | NA | 0 |
| PRAD | TCGA-HC-8260-01A | TCGA-HC-8260 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 6 | 3 | 3 | 2 | 42879877 | 39817544 | tier4 | 5UTR-CDS | 18179 | NA | 0 |
| PRAD | TCGA-HC-8262-01A | TCGA-HC-8262 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 45 | 48 | 46 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18180 | NA | 0 |
| PRAD | TCGA-HC-A48F-01A | TCGA-HC-A48F | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 16 | 17 | 13 | 2 | 42879877 | 39817544 | tier1 | 5UTR-CDS | 18181 | NA | 0 |
| PRAD | TCGA-HC-A632-01A | TCGA-HC-A632 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 29 | 27 | 21 | 2 | 42870046 | 39956869 | tier1 | CDS-5UTR | 18182 | NA | 0 |
| PRAD | TCGA-HC-A6HY-01A | TCGA-HC-A6HY | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 18 | 11 | 11 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18183 | NA | 0 |
| PRAD | TCGA-HC-A76X-01A | TCGA-HC-A76X | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 165 | 157 | 142 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18184 | NA | 0 |
| PRAD | TCGA-HC-A8D0-01A | TCGA-HC-A8D0 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 14 | 15 | 12 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18185 | NA | 0 |
| PRAD | TCGA-HC-A8D1-01A | TCGA-HC-A8D1 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 24 | 8 | 8 | 2 | 42879877 | 39817544 | tier1 | 5UTR-CDS | 18186 | NA | 0 |
| PRAD | TCGA-J4-8198-01A | TCGA-J4-8198 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 17 | 12 | 11 | 2 | 42880008 | 39817544 | tier2 | 5UTR-CDS | 18187 | NA | 0 |
| PRAD | TCGA-J4-A67K-01A | TCGA-J4-A67K | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 26 | 38 | 34 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18188 | NA | 0 |
| PRAD | TCGA-J4-A67L-01A | TCGA-J4-A67L | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 3 | 8 | 6 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18189 | NA | 0 |
| PRAD | TCGA-J4-A67R-01A | TCGA-J4-A67R | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 3 | 5 | 4 | 2 | 42879877 | 39817544 | tier1 | 5UTR-CDS | 18190 | NA | 0 |
| PRAD | TCGA-J4-A67S-01A | TCGA-J4-A67S | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 29 | 17 | 16 | 2 | 42880008 | 39817544 | tier2 | 5UTR-CDS | 18191 | NA | 0 |
| PRAD | TCGA-J4-A67T-01A | TCGA-J4-A67T | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 4 | 8 | 8 | 2 | 42880008 | 39956869 | tier1 | 5UTR-5UTR | 18192 | NA | 0 |
| PRAD | TCGA-J4-A6G1-01A | TCGA-J4-A6G1 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 2 | 5 | 3 | 2 | 42879877 | 39817544 | tier2 | 5UTR-CDS | 18193 | NA | 0 |
| PRAD | TCGA-J4-A6M7-01A | TCGA-J4-A6M7 | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 99 | 60 | 54 | 2 | 42870046 | 39817544 | tier1 | In-frame | 18194 | NA | 0 |
| PRAD | TCGA-J4-A83I-01A | TCGA-J4-A83I | TMPRSS2|ERG | TMPRSS2 | ERG | 21 | 21 | -1 | -1 | 48 | 38 | 37 | 2 | 42880008 | 39817544 | tier1 | 5UTR-CDS | 18195 | NA | 0 |
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