Transcript Fusion
The transcript fusion data of TCGA were retrieved from the TumorFusions database.
List of the transcript fusions of the GESPs in each cancer type
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| Cancer Type | TCGA_barcode | Patient | Fusion_transcript | Gene_A | Gene_B | Chr_A | Chr_B | Strand_A | Strand_B | #_Discordant_Pairs | #_JSR | #_perfect_JSR | Evalue | Junction_A | Junction_B | Tier | Frame | TN | WGS_validation | Centrality |
| ACC | TCGA-OR-A5J2-01A | TCGA-OR-A5J2 | AJAP1|CYTH3 | AJAP1 | CYTH3 | 1 | 7 | 1 | -1 | 9 | 1 | 1 | 0.47 | 4715514 | 6230162 | tier2 | Out-of-frame | 711 | NA | 0.36337 |
| ACC | TCGA-OR-A5KY-01A | TCGA-OR-A5KY | AMBRA1|LRP4 | AMBRA1 | LRP4 | 11 | 11 | -1 | -1 | 16 | 3 | 2 | 0.44 | 46515158 | 46898188 | tier1 | In-frame | 869 | NA | 0.35806 |
| ACC | TCGA-OR-A5KY-01A | TCGA-OR-A5KY | B4GALT5|ASIP | B4GALT5 | ASIP | 20 | 20 | -1 | 1 | 26 | 38 | 36 | 100 | 48330113 | 32848171 | tier1 | CDS-5UTR | 1877 | NA | 0.34576 |
| ACC | TCGA-OR-A5J9-01A | TCGA-OR-A5J9 | BSG|STAT6 | BSG | STAT6 | 19 | 12 | 1 | -1 | 2 | 30 | 19 | 1 | 583492 | 57496773 | tier3 | NA | 2250 | NA | 0.37685 |
| ACC | TCGA-OR-A5J8-01A | TCGA-OR-A5J8 | CAPRIN1|CD151 | CAPRIN1 | CD151 | 11 | 11 | 1 | 1 | 50 | 14 | 12 | 0.84 | 34112225 | 838133 | tier1 | In-frame | 2972 | NA | 0.36218 |
| ACC | TCGA-OR-A5JS-01A | TCGA-OR-A5JS | CCNG1|SLCO6A1 | CCNG1 | SLCO6A1 | 5 | 5 | 1 | -1 | 11 | 4 | 3 | 0.27 | 162871487 | 101709198 | tier1 | 3UTR-CDS | 3221 | NA | 0.36879 |
| ACC | TCGA-OR-A5KX-01A | TCGA-OR-A5KX | CDH12|BNIP3L | CDH12 | BNIP3L | 5 | 8 | -1 | 1 | 5 | 3 | 3 | 0.54 | 22505379 | 26362823 | tier1 | NA | 3380 | NA | 0.36093 |
| ACC | TCGA-OR-A5J7-01A | TCGA-OR-A5J7 | CNNM2|C10orf26 | CNNM2 | C10orf26 | 10 | 10 | 1 | 1 | 3 | 1 | 1 | 0.18 | 104828479 | 104557750 | tier2 | Out-of-frame | 3918 | NA | 0 |
| ACC | TCGA-OR-A5J1-01A | TCGA-OR-A5J1 | CWC27|PPAP2A | CWC27 | PPAP2A | 5 | 5 | 1 | -1 | 3 | 7 | 7 | 1.4 | 64181373 | 54721867 | tier1 | Out-of-frame | 4467 | NA | 0.35182 |
| ACC | TCGA-OR-A5JM-01A | TCGA-OR-A5JM | DLK1|STAT6 | DLK1 | STAT6 | 14 | 12 | 1 | -1 | 3 | 10 | 2 | 0.85 | 101201464 | 57496773 | tier1 | NA | 4902 | NA | 0.37401 |
| ACC | TCGA-OR-A5LM-01A | TCGA-OR-A5LM | DLK1|STAT6 | DLK1 | STAT6 | 14 | 12 | 1 | -1 | 2 | 24 | 4 | 0.85 | 101201464 | 57496773 | tier3 | NA | 4903 | NA | 0.37401 |
| ACC | TCGA-OR-A5J2-01A | TCGA-OR-A5J2 | DLK1|THSD4 | DLK1 | THSD4 | 14 | 15 | 1 | 1 | 2 | 20 | 6 | 0.55 | 101201464 | 72072881 | tier4 | 3UTR-CDS | 4904 | NA | 0.35429 |
| ACC | TCGA-OR-A5KX-01A | TCGA-OR-A5KX | DNAJC21|SGCZ | DNAJC21 | SGCZ | 5 | 8 | 1 | -1 | 2 | 2 | 2 | 0.49 | 34930021 | 14181713 | tier2 | Out-of-frame | 4943 | NA | 0.34985 |
| ACC | TCGA-OR-A5K5-01A | TCGA-OR-A5K5 | DNM2|QTRT1 | DNM2 | QTRT1 | 19 | 19 | 1 | 1 | 48 | 63 | 50 | 0.002 | 10829079 | 10817978 | tier1 | Out-of-frame | 4982 | NA | 0.37763 |
| ACC | TCGA-OR-A5J9-01A | TCGA-OR-A5J9 | DNM2|SLC47A1 | DNM2 | SLC47A1 | 19 | 17 | 1 | 1 | 2 | 3 | 2 | 0.054 | 10942573 | 19482057 | tier2 | 3UTR-3UTR | 4991 | NA | 0.37695 |
| ACC | TCGA-OR-A5JY-01A | TCGA-OR-A5JY | FGD4|SLCO1A2 | FGD4 | SLCO1A2 | 12 | 12 | 1 | -1 | 12 | 5 | 4 | 0.19 | 32552893 | 21487643 | tier1 | CDS-5UTR | 6436 | NA | 0.37111 |
| ACC | TCGA-OR-A5KX-01A | TCGA-OR-A5KX | FN3KRP|KCNQ1 | FN3KRP | KCNQ1 | 17 | 11 | 1 | 1 | 25 | 10 | 10 | 0.71 | 80684478 | 2868997 | tier1 | In-frame | 6598 | NA | 0.36203 |
| ACC | TCGA-OR-A5JA-01A | TCGA-OR-A5JA | FRS2|NTN4 | FRS2 | NTN4 | 12 | 12 | 1 | -1 | 2 | 2 | 1 | 0.25 | 69864310 | 96063922 | tier3 | 5UTR-CDS | 6768 | NA | 0.37869 |
| ACC | TCGA-OR-A5LM-01A | TCGA-OR-A5LM | FTSJD2|RP4-761I2.2 | FTSJD2 | RP4-761I2.2 | 6 | 6 | 1 | 1 | 18 | 11 | 10 | 2.4 | 37441377 | 11134636 | tier1 | Out-of-frame | 6820 | NA | 0.34665 |
| ACC | TCGA-OR-A5K1-01A | TCGA-OR-A5K1 | GJA1|STAT6 | GJA1 | STAT6 | 6 | 12 | 1 | -1 | 2 | 10 | 8 | 0.12 | 121770873 | 57496773 | tier3 | NA | 7077 | NA | 0.37965 |
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